Annotation of genomic variants are available in Low Frequency Variant Detection Analysis and RNA Variant Detection Analysis by HiPipe Professional(28 Nov 2017).
Annotation of genomic variants is supported in Haplotype-based DNA Variant Detection Analysis by HiPipe Professional (25 Sep 2017).
Low Frequency Variant Detection Analysis is now supported by
HiPipe Professional (6 July 2017).
HiPipe provides high performance NGS
data analysis pipelines with intuitive user interface to the community
so that researchers with minimum IT or bioinformatics knowledge can
perform common analyses on NGS data. 3 TB of storage space is reserved
for each task. Please see Info for details.
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Genome & Exome Variant Detection
Pipelining raw sequences into BWA for
mapping and then into GATK for variant detection. Usually, a human
exome (100x) can be processed in one hour or so.